cosifer.handlers package

Submodules

cosifer.handlers.file_handler module

FileHandler interface.

class cosifer.handlers.file_handler.FileHandler(**kwargs)

Bases: object

FileHandler interface class.

dump(buffer)

Dump object to the file.

Parameters

buffer (object) – a buffer-like object.

exist()

Check whether the file exists.

load()

Load object from the file.

cosifer.handlers.fs_handler module

FileSystemHandler inferencer.

class cosifer.handlers.fs_handler.FileSystemHandler(filepath, **kwargs)

Bases: cosifer.handlers.file_handler.FileHandler

FileSystemHandler inferencer.

filepath

path to the file.

Type

str

dump(buffer, file_type='w')

Dump object to the file.

Parameters

• buffer (object) – a buffer-like object.

• file_type (str, optional) – type of the file. Defaults to ‘w’.

exist()

Check whether the file exists.

Returns

true if the file exists, false otherwise.

Return type

bool

filepath = None

load(file_type='r')

Load object from the file.

Argd:

file_type (str, optional): type of the file. Defaults to ‘r’.

Returns

the loaded file.

Return type

IOBase

cosifer.handlers.network_handler module

NetworkHandler interface.

class cosifer.handlers.network_handler.NetworkHandler(filepath=None, **kwargs)

Bases: cosifer.handlers.fs_handler.FileSystemHandler

NetwrokHandler interface.

graph

graph representing the network.

Type

cosifer.collections.graph,Graph

trained

flag to indicate whether the inference has been performed.

Type

bool

filepath

path to the file where the graph is stored.

Type

str

parameters

parameters for the inferencer.

Type

dict

dump(scaled=True, interaction_symbol='<->', threshold=None, compression='gzip')

Dump graph to the file.

Parameters

• scaled (bool, optional) – flag to activate min-max scaling of the edges. Defaults to True.

• interaction_symbol (str, optional) – symbol to depict interactions between labels. Defaults to ‘<->’.

• threshold (float, optional) – threshold to apply to the intensity. Defaults to None.

• compression (str, optional) – compression type. Defaults to ‘gzip’.

filepath = None

graph = None

load(compression='gzip')

Load graph from the file.

Argd:

compression (str, optional): compression type. Defaults to ‘gzip’.

trained = False

Module contents